Gene: KDM1A ENSG00000004487

Description

lysine (K)-specific demethylase 1A [Source:HGNC Symbol;Acc:29079]

Gene Synonyms

AOF2, BHC110, KDM1, KIAA0601, LSD1

Location

Chromosome 1: 23,345,941-23,410,182 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 7 transcripts (splice variants), 3 paralogues and is associated with 4 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000400181.4	KDM1A-002	3059	876aa	ENSP00000383042.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53278	O60341	NM_001009999.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000542151.1	KDM1A-201	3058	876aa	ENSP00000439072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6S0T5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000356634.3	KDM1A-001	3033	852aa	ENSP00000349049.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30627	O60341	NM_015013.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000494920.1	KDM1A-004	905	301aa	ENSP00000473294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMP9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000465864.1	KDM1A-005	568	189aa	ENSP00000473297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMQ1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000602503.1	KDM1A-006	2810	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481879.1	KDM1A-003	525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: KDM1A ENSG00000004487

Summary