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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GRIK1 ENSG00000171189

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Description

glutamate receptor, ionotropic, kainate 1 [Source:HGNC Symbol;Acc:4579]

Gene Synonyms

EAA3, EEA3, GLR5, GLUR5, GluK1

Location

Chromosome 21: 30,909,254-31,312,351 reverse strand.

GRCh37:CM000683.1

About this gene

This gene has 10 transcripts (splice variants) and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399907.1	GRIK1-002	3472	918aa	ENSP00000382791.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42913	P39086 Q71UA3 Q9UNN1	NM_000830.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000399914.1	GRIK1-003	3624	934aa	ENSP00000382798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EPY9 Q9UNN1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000399909.1	GRIK1-008	3427	903aa	ENSP00000382793.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EPZ0 Q9UNN1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000399913.1	GRIK1-006	3234	920aa	ENSP00000382797.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3DSE2 E9PD61 Q71UA3 Q9UNN1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000327783.4	GRIK1-004	3179	949aa	ENSP00000327687.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENK3 Q71UA3 Q9UNN1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000389125.3	GRIK1-001	3140	905aa	ENSP00000373777.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33530	D3DSE2 P39086 Q9UNN1	NM_175611.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000535441.1	GRIK1-202	2769	922aa	ENSP00000446326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3DSE2 F5H1W5 Q71UA3 Q9UNN1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000309434.7	GRIK1-201	2763	920aa	ENSP00000311646.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W7X3 Q71UA3 Q9UNN1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000389124.2	GRIK1-005	2712	871aa	ENSP00000373776.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BYG7 Q71UA3 Q9UNN1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000472429.1	GRIK1-007	1775	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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