Description
transient receptor potential cation channel, subfamily V, member 1 [Source:HGNC Symbol;Acc:12716]
Gene Synonyms
VR1
Location
Chromosome 17: 3,468,738-3,500,392 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 9 transcripts (splice variants) and 6 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000571088.1 | TRPV1-001 | 4105 | 839aa | ENSP00000461007.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45576 | Q8IZY9 Q8NER1 | NM_018727.5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000174621.6 | TRPV1-201 | 4170 | 837aa | ENSP00000174621.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QK85 Q8IZY9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000399759.3 | TRPV1-002 | 4092 | 839aa | ENSP00000382661.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45576 | Q8IZY9 Q8NER1 | NM_080705.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000399756.4 | TRPV1-003 | 4068 | 839aa | ENSP00000382659.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45576 | Q8IZY9 Q8NER1 | NM_080706.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000425167.2 | TRPV1-005 | 2607 | 850aa | ENSP00000409627.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EQ78 Q8IZY9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000576351.1 | TRPV1-004 | 2525 | 829aa | ENSP00000459042.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1R6 Q8IZY9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000310522.5 | TRPV1-006 | 2340 | 779aa | ENSP00000311692.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ESJ2 Q8IZY9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000574085.1 | TRPV1-007 | 2644 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000570742.1 | TRPV1-008 | 492 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
