Description
major histocompatibility complex, class II, DQ beta 1 [Source:HGNC Symbol;Acc:4944]
Gene Synonyms
CELIAC1, HLA-DQB, IDDM1
Location
Chromosome 6: 32,627,244-32,636,160 reverse strand.
GRCh37:CM000668.1
View alleles of this gene on alternative sequences
About this gene
This gene has 8 transcripts (splice variants), 1 gene allele, 13 paralogues and is associated with 8 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000374943.4 | HLA-DQB1-002 | 1656 | 269aa | ENSP00000364080.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59006 | F8LFZ1 F8LFZ3 I4EPK4 I4EPK9 L0BW29 L0BX86 L0BX94 M4YQH8 N0A0M1 N0A4C3 O19741 O78224 Q4VC55 Q5BLN2 Q5BLN3 Q5SU54 Q67AI9 Q67AJ0 Q8MHQ2 Q8SNB9 Q9BCT8 R4QU49 S6CPW2 S6CPW3 T1R348 | NM_001243961.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000399084.1 | HLA-DQB1-003 | 1734 | 261aa | ENSP00000382034.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43451 | F8LFZ1 F8LFZ3 I4EPK4 I4EPK9 L0BW29 L0BX86 L0BX94 M4YQH8 N0A0M1 N0A4C3 O19741 O78224 Q4VC55 Q5BLN2 Q5BLN3 Q5Y7D6 Q67AI9 Q67AJ0 Q8MHQ2 Q8SNB9 Q9BCT8 R4QU49 S6CPW2 S6CPW3 T1R348 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000434651.2 | HLA-DQB1-001 | 1642 | 261aa | ENSP00000407332.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43451 | F8LFZ1 F8LFZ3 I4EPK4 I4EPK9 L0BW29 L0BX86 L0BX94 M4YQH8 N0A0M1 N0A4C3 O19741 O78224 Q4VC55 Q5BLN2 Q5BLN3 Q5Y7D6 Q67AI9 Q67AJ0 Q8MHQ2 Q8SNB9 Q9BCT8 R4QU49 S6CPW2 S6CPW3 T1R348 | NM_002123.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000399079.3 | HLA-DQB1-004 | 1501 | 224aa | ENSP00000382029.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2AAZ0 F8LFZ1 F8LFZ3 I4EPK4 I4EPK9 L0BW29 L0BX86 L0BX94 M4YQH8 N0A0M1 N0A4C3 O19741 O78224 Q4VC55 Q5BLN2 Q5BLN3 Q8MHQ2 Q8SNB9 Q9BCT8 R4QU49 S6CPW2 S6CPW3 T1R348 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000399082.3 | HLA-DQB1-007 | 1219 | 134aa | ENSP00000382032.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2AAY8 Q4VC55 Q5BLN2 Q5BLN3 Q8MHQ2 Q8SNB9 Q9BCT8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000484729.2 | HLA-DQB1-008 | 783 | 136aa | ENSP00000436686.1 | Nonsense mediated decay | E9PIB1 L0BW29 L0BX86 L0BX94 M4YQH8 N0A0M1 N0A4C3 O19741 O78224 Q4VC55 Q5BLN2 Q5BLN3 Q8MHQ2 Q8SNB9 Q9BCT8 R4QU49 T1R348 | - | - | |
| ENST00000460185.1 | HLA-DQB1-009 | 428 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000487676.1 | HLA-DQB1-005 | 4644 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
