Description
integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) [Source:HGNC Symbol;Acc:6140]
Gene Synonyms
CD49D, IA4
Location
Chromosome 2: 182,321,929-182,400,914 forward strand.
GRCh37:CM000664.1
About this gene
This gene has 11 transcripts (splice variants) and 17 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000397033.2 | ITGA4-001 | 4189 | 1032aa | ENSP00000380227.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42788 | E7EP60 P13612 Q8IUA2 | NM_000885.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000233573.6 | ITGA4-006 | 2070 | 614aa | ENSP00000233573.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EP60 Q6PJE7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000339307.4 | ITGA4-003 | 1403 | 195aa | ENSP00000340149.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7Z4L6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000478440.1 | ITGA4-005 | 1144 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000476089.1 | ITGA4-002 | 1846 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000465522.1 | ITGA4-004 | 1721 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476824.1 | ITGA4-008 | 1004 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000490435.1 | ITGA4-009 | 720 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000484404.1 | ITGA4-007 | 592 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000473002.1 | ITGA4-010 | 573 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000468948.1 | ITGA4-011 | 393 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
