Description
coiled-coil alpha-helical rod protein 1 [Source:HGNC Symbol;Acc:13930]
Gene Synonyms
C6orf18, HCR, SBP
Location
Chromosome 6: 31,110,216-31,126,015 reverse strand.
GRCh37:CM000668.1
View alleles of this gene on alternative sequences
About this gene
This gene has 30 transcripts (splice variants) and 1 gene allele.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000396268.3 | CCHCR1-002 | 2958 | 871aa | ENSP00000379566.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43445 | A2ABH3 A2ABH4 A9XAC7 A9XAF5 A9XAG5 A9XAL3 B0V092 B4DIA2 D6RB88 D6RBG1 D6RD84 D6RDI7 E7EQC5 E7EQE8 E9PGB6 Q8TD31 | NM_001105564.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000376266.5 | CCHCR1-001 | 2625 | 782aa | ENSP00000365442.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4695 | A2ABH3 A2ABH4 A9XAC7 A9XAF5 A9XAG5 A9XAL3 B0V092 B4DIA2 D6RB88 D6RBG1 D6RD84 D6RDI7 E7EQC5 E7EQE8 E9PGB6 Q8TD31 | NM_019052.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000451521.2 | CCHCR1-011 | 2587 | 835aa | ENSP00000401039.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47397 | A9XAC7 A9XAF5 A9XAG5 A9XAL3 D6RAE7 E7EPK4 E9PHV1 Q8TD31 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000396263.2 | CCHCR1-003 | 2490 | 729aa | ENSP00000379561.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2ABH1 A2ABH3 A2ABH4 A9XAC7 A9XAF5 A9XAG5 A9XAL3 B0V092 D6RB88 D6RBG1 D6RD84 D6RDI7 E7EQC5 E7EQE8 E9PGB6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000506831.1 | CCHCR1-029 | 861 | 36aa | ENSP00000425435.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RD84 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000426967.1 | CCHCR1-007 | 838 | 216aa | ENSP00000402432.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2ABH5 B0V092 D6RB88 D6RBG1 D6RD84 D6RDI7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000448162.2 | CCHCR1-005 | 699 | 188aa | ENSP00000390027.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2ABH3 A2ABH4 A9XAC7 B0V092 D6RB88 D6RBG1 D6RD84 D6RDI7 E7EQC5 E7EQE8 E9PGB6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000455279.2 | CCHCR1-009 | 676 | 152aa | ENSP00000398715.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2ABH4 B0V092 D6RB88 D6RBG1 D6RD84 D6RDI7 E7EQE8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000448141.2 | CCHCR1-019 | 664 | 191aa | ENSP00000414323.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9XAC7 D6RAE7 E7EPK4 E9PHV1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000502557.1 | CCHCR1-027 | 662 | 118aa | ENSP00000425377.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0V092 D6RB88 D6RBG1 D6RD84 D6RDI7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507829.1 | CCHCR1-018 | 589 | 115aa | ENSP00000420911.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RB88 D6RBG1 D6RD84 D6RDI7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507751.1 | CCHCR1-028 | 588 | 158aa | ENSP00000420941.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2ABH4 B0V092 D6RB88 D6RBG1 D6RD84 D6RDI7 E7EQE8 E9PGB6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000503420.1 | CCHCR1-026 | 580 | 126aa | ENSP00000421992.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAE7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000508683.1 | CCHCR1-020 | 567 | 159aa | ENSP00000421393.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9XAC7 D6RAE7 E9PHV1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000503934.1 | CCHCR1-021 | 560 | 139aa | ENSP00000425595.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0V092 D6RB88 D6RBG1 D6RD84 D6RDI7 E7EQE8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507226.1 | CCHCR1-024 | 544 | 96aa | ENSP00000424335.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RB88 D6RBG1 D6RD84 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000513222.1 | CCHCR1-023 | 511 | 140aa | ENSP00000425682.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EQC5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507892.1 | CCHCR1-025 | 479 | 41aa | ENSP00000424164.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RBG1 D6RD84 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000428174.1 | CCHCR1-004 | 470 | 126aa | ENSP00000389303.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5STF0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000488920.2 | CCHCR1-008 | 715 | 80aa | ENSP00000422000.1 | Nonsense mediated decay | D6RA02 | - | - | |
| ENST00000508852.1 | CCHCR1-032 | 589 | 80aa | ENSP00000422503.1 | Nonsense mediated decay | D6R9W9 D6RBG1 D6RD84 | - | - | |
| ENST00000507459.1 | CCHCR1-033 | 582 | 80aa | ENSP00000421523.1 | Nonsense mediated decay | D6R9W9 D6RBG1 D6RD84 | - | - | |
| ENST00000512418.1 | CCHCR1-030 | 565 | 44aa | ENSP00000426883.1 | Nonsense mediated decay | D6RE89 | - | - | |
| ENST00000480060.1 | CCHCR1-016 | 601 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000509552.1 | CCHCR1-017 | 2304 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000475684.2 | CCHCR1-010 | 786 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000467553.2 | CCHCR1-013 | 589 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000486060.1 | CCHCR1-014 | 582 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000505392.1 | CCHCR1-031 | 547 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000464012.1 | CCHCR1-012 | 512 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
