Description
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:HGNC Symbol;Acc:13917]
Gene Synonyms
BAT1, D6S81E, U84, UAP56
Location
Chromosome 6: 31,497,996-31,510,225 reverse strand.
GRCh37:CM000668.1
View alleles of this gene on alternative sequences
About this gene
This gene has 25 transcripts (splice variants), 1 gene allele and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000396172.1 | DDX39B-001 | 2133 | 428aa | ENSP00000379475.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4697 | F6QWI5 F6S4E6 F6TRA5 F6U6E2 F6UN21 F6WLT2 Q13838 Q7KYK3 | NM_004640.6 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000417556.2 | DDX39B-202 | 2178 | 443aa | ENSP00000412582.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6QWI5 F8VQ10 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000458640.1 | DDX39B-002 | 2003 | 428aa | ENSP00000416269.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4697 | F6QWI5 F6S4E6 F6TRA5 F6U6E2 F6UN21 F6WLT2 Q13838 Q7KYK3 | NM_080598.5 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000376177.2 | DDX39B-006 | 1529 | 425aa | ENSP00000365347.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6QWI5 F6S4E6 F6TRA5 F6U6E2 F6UN21 F6WLT2 Q5STU3 Q7KYK3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000415382.2 | DDX39B-201 | 1433 | 350aa | ENSP00000392669.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DP52 F6UJC5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000453105.2 | DDX39B-204 | 1337 | 243aa | ENSP00000400328.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DIJ6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000427214.1 | DDX39B-017 | 1005 | 289aa | ENSP00000399371.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6QWI5 F6S4E6 F6TRA5 F6U6E2 F6UN21 F6WLT2 Q7KYK3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000456662.1 | DDX39B-014 | 932 | 231aa | ENSP00000416350.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6QWI5 F6S4E6 F6U6E2 Q7KYK3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000419338.1 | DDX39B-018 | 928 | 235aa | ENSP00000410313.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6QWI5 F6S4E6 F6U6E2 F6UN21 Q7KYK3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000431908.1 | DDX39B-019 | 914 | 245aa | ENSP00000408000.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6UJC5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000449074.2 | DDX39B-203 | 867 | 139aa | ENSP00000391946.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EMX2 F6QWI5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000428098.1 | DDX39B-009 | 817 | 238aa | ENSP00000392672.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6QWI5 F6S4E6 F6TRA5 F6U6E2 F6UN21 Q7KYK3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000456976.1 | DDX39B-012 | 720 | 125aa | ENSP00000393984.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6QWI5 F6U6E2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000428450.1 | DDX39B-013 | 633 | 197aa | ENSP00000405707.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6QWI5 F6R6M7 F6S2B7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000449757.1 | DDX39B-016 | 591 | 187aa | ENSP00000409426.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6QWI5 F6QYI9 F6U6E2 Q7KYK3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000418897.1 | DDX39B-011 | 583 | 136aa | ENSP00000399841.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6QWI5 F6SXL5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000419020.1 | DDX39B-010 | 583 | 132aa | ENSP00000405245.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6QWI5 F6S2B7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000417023.1 | DDX39B-020 | 561 | 187aa | ENSP00000406422.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000484566.1 | DDX39B-022 | 857 | 141aa | ENSP00000436220.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000462421.1 | DDX39B-003 | 618 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481456.1 | DDX39B-005 | 5158 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000462256.1 | DDX39B-004 | 4027 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000482195.1 | DDX39B-008 | 1232 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000474961.1 | DDX39B-007 | 974 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000478365.1 | DDX39B-021 | 439 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
