Gene: CXCL12 ENSG00000107562

Description

chemokine (C-X-C motif) ligand 12 [Source:HGNC Symbol;Acc:10672]

Gene Synonyms

IRH, PBSF, SCYB12, SDF-1a, SDF-1b, SDF1, SDF1A, SDF1B, TLSF, TLSF-a, TLSF-b, TPAR1

Location

Chromosome 10: 44,793,038-44,881,941 reverse strand.

GRCh37:CM000672.1

About this gene

This gene has 8 transcripts (splice variants).

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395794.2	CXCL12-004	1052	140aa	ENSP00000379140.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53527	P48061	NM_001178134.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000374429.2	CXCL12-002	3532	93aa	ENSP00000363551.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44373	P48061	NM_000609.6	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000343575.6	CXCL12-001	1857	89aa	ENSP00000339913.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7207	P48061	NM_199168.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000395793.3	CXCL12-005	665	103aa	ENSP00000379139.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60518	H7BYN8	NM_001277990.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000395795.4	CXCL12-201	618	90aa	ENSP00000379141.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P48061	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000374426.2	CXCL12-003	470	119aa	ENSP00000363548.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31186	P48061	NM_001033886.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000496375.1	CXCL12-006	803	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488591.1	CXCL12-007	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: CXCL12 ENSG00000107562

Summary