Description
CDC-like kinase 3 [Source:HGNC Symbol;Acc:2071]
Gene Synonyms
PHCLK3, PHCLK3/152, clk3
Location
Chromosome 15: 74,890,841-74,932,057 forward strand.
GRCh37:CM000677.1
About this gene
This gene has 29 transcripts (splice variants) and 4 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000395066.3 | CLK3-003 | 2621 | 638aa | ENSP00000378505.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45304 | B3KTV2 H3BRE4 H3BRT8 H3BTW9 H3BUL5 H3BVF8 P49761 | NM_001130028.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000345005.4 | CLK3-001 | 1846 | 490aa | ENSP00000344112.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10265 | B3KTV2 H3BRE4 H3BRT8 H3BTW9 H3BUL5 H3BVF8 P49761 | NM_003992.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000352989.5 | CLK3-202 | 1662 | 467aa | ENSP00000323106.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KTV2 G5E959 H3BRE4 H3BRT8 H3BTW9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000348245.3 | CLK3-201 | 1634 | 152aa | ENSP00000321136.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQR7 H3BRT8 P49761 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000568139.1 | CLK3-013 | 918 | 306aa | ENSP00000455762.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQG1 H3BTW9 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000563842.1 | CLK3-019 | 860 | 190aa | ENSP00000456202.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRE4 H3BTW9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000564096.1 | CLK3-015 | 805 | 239aa | ENSP00000458099.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRT8 H3BUL5 H3BVF8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566126.1 | CLK3-010 | 732 | 224aa | ENSP00000457696.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRT8 H3BUL5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566926.1 | CLK3-023 | 646 | 193aa | ENSP00000454961.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BNQ5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000563418.1 | CLK3-024 | 575 | 70aa | ENSP00000456431.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000562389.1 | CLK3-009 | 572 | 117aa | ENSP00000456399.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRT8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562670.1 | CLK3-014 | 544 | 145aa | ENSP00000455905.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQR7 H3BRT8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000563297.1 | CLK3-016 | 526 | 19aa | ENSP00000457362.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BTW9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000568488.1 | CLK3-027 | 481 | 160aa | ENSP00000457936.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRT8 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000483723.1 | CLK3-002 | 1749 | 152aa | ENSP00000431825.1 | Nonsense mediated decay | H3BQR7 H3BRT8 P49761 | - | - | |
| ENST00000564468.1 | CLK3-020 | 929 | 59aa | ENSP00000454785.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000569063.1 | CLK3-026 | 833 | 173aa | ENSP00000456278.1 | Nonsense mediated decay | H3BQR7 H3BRK0 H3BRT8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000564353.1 | CLK3-011 | 2847 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000561673.1 | CLK3-025 | 639 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000567992.1 | CLK3-012 | 603 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000567805.1 | CLK3-021 | 327 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000454830.2 | CLK3-008 | 3787 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000569406.1 | CLK3-006 | 3591 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000562078.1 | CLK3-004 | 2455 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000568605.1 | CLK3-007 | 1047 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000568232.1 | CLK3-005 | 958 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000570296.1 | CLK3-017 | 916 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000562626.1 | CLK3-022 | 812 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000563112.1 | CLK3-018 | 665 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
