Description
LIM domain and actin binding 1 [Source:HGNC Symbol;Acc:24636]
Gene Synonyms
EPLIN, SREBP3
Location
Chromosome 12: 50,569,571-50,677,329 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 16 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000394943.3 | LIMA1-001 | 3669 | 760aa | ENSP00000378400.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44877 | F8VTU2 F8VVQ7 Q59FE8 Q9UHB6 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000547825.1 | LIMA1-007 | 3920 | 457aa | ENSP00000448706.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58230 | Q9UHB6 | NM_001243775.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000341247.4 | LIMA1-003 | 3706 | 759aa | ENSP00000340184.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8802 | F8VTU2 F8VVQ7 Q9UHB6 | NM_016357.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000552783.1 | LIMA1-002 | 3612 | 600aa | ENSP00000448779.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55826 | Q9UHB6 | NM_001113547.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000552823.1 | LIMA1-006 | 3254 | 599aa | ENSP00000450266.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9UHB6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000552491.1 | LIMA1-017 | 2652 | 456aa | ENSP00000448463.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VS07 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000552909.1 | LIMA1-004 | 2162 | 598aa | ENSP00000450087.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VQE1 F8VS07 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000551691.1 | LIMA1-009 | 583 | 130aa | ENSP00000447975.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VTU2 F8VVQ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550592.1 | LIMA1-008 | 567 | 111aa | ENSP00000449890.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VVQ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000552720.1 | LIMA1-005 | 2457 | 388aa | ENSP00000448411.1 | Nonsense mediated decay | F8VRN8 F8VTU2 F8VVQ7 | - | - | |
| ENST00000552008.1 | LIMA1-011 | 566 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000552338.1 | LIMA1-015 | 555 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000550611.1 | LIMA1-010 | 543 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000549064.1 | LIMA1-014 | 648 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000551486.1 | LIMA1-012 | 587 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000552045.1 | LIMA1-016 | 386 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
