Description
polybromo 1 [Source:HGNC Symbol;Acc:30064]
Gene Synonyms
BAF180, PB1
Location
Chromosome 3: 52,579,368-52,719,933 reverse strand.
GRCh37:CM000665.1
About this gene
This gene has 20 transcripts (splice variants) and is associated with 94 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000394830.3 | PBRM1-002 | 5071 | 1582aa | ENSP00000378307.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43099 | C9J053 C9J409 C9J9L6 C9JCJ2 C9JPI5 C9JQF1 Q86U86 | NM_018313.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000356770.4 | PBRM1-001 | 7523 | 1602aa | ENSP00000349213.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J053 C9J409 C9J9L6 C9JCJ2 C9JPI5 C9JQF1 Q5EBM5 Q86U86 Q9NVM2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000296302.7 | PBRM1-008 | 5145 | 1689aa | ENSP00000296302.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J053 C9J409 C9J9L6 C9JCJ2 C9JPI5 C9JQF1 Q86U86 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000409114.3 | PBRM1-006 | 5015 | 1652aa | ENSP00000386643.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J053 C9J409 C9J9L6 C9JCJ2 C9JPI5 C9JQF1 Q86U86 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000409057.1 | PBRM1-003 | 4980 | 1634aa | ENSP00000386593.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J053 C9J409 C9J9L6 C9JCJ2 C9JPI5 C9JQF1 Q5EBM5 Q86U86 Q9NVM2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000410007.1 | PBRM1-007 | 4905 | 1609aa | ENSP00000386529.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J053 C9J409 C9J9L6 C9JCJ2 C9JPI5 C9JQF1 Q5EBM5 Q86U86 Q9NVM2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000409767.1 | PBRM1-005 | 4849 | 1597aa | ENSP00000386601.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J053 C9J409 C9J9L6 C9JCJ2 C9JPI5 C9JQF1 Q86U86 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000337303.4 | PBRM1-009 | 4825 | 1582aa | ENSP00000338302.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J053 C9J409 C9J9L6 C9JCJ2 C9JPI5 C9JQF1 Q86U86 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000423351.1 | PBRM1-019 | 4385 | 1460aa | ENSP00000387775.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J053 C9J409 C9J9L6 C9JCJ2 C9JPI5 C9JQF1 E7EVG2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000446103.1 | PBRM1-004 | 3256 | 1085aa | ENSP00000397662.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y5B5 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000431678.1 | PBRM1-018 | 809 | 230aa | ENSP00000409939.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J053 C9J409 C9J9L6 C9JCJ2 C9JPI5 C9JQF1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000420148.1 | PBRM1-013 | 783 | 152aa | ENSP00000389390.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J053 C9J409 C9J9L6 C9JCJ2 C9JQF1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000439181.1 | PBRM1-015 | 547 | 43aa | ENSP00000404635.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J409 C9J9L6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000449505.1 | PBRM1-016 | 517 | 118aa | ENSP00000412401.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J053 C9J409 C9J9L6 C9JCJ2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000450271.1 | PBRM1-017 | 517 | 87aa | ENSP00000416851.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J409 C9J9L6 C9JCJ2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000458294.1 | PBRM1-012 | 476 | 43aa | ENSP00000411895.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J409 C9J9L6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000424867.1 | PBRM1-014 | 457 | 26aa | ENSP00000397399.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J9L6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000412587.1 | PBRM1-020 | 4766 | 856aa | ENSP00000404579.1 | Nonsense mediated decay | C9J053 C9J409 C9J9L6 C9JCJ2 C9JPI5 C9JQF1 Q86U86 | - | - | |
| ENST00000462207.1 | PBRM1-010 | 1921 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000480064.1 | PBRM1-011 | 919 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
