Description
aryl hydrocarbon receptor nuclear translocator-like [Source:HGNC Symbol;Acc:701]
Gene Synonyms
BHLHE5, BMAL1, BMAL1c, JAP3, MOP3, PASD3, TIC, bHLHe5
Location
Chromosome 11: 13,298,199-13,408,813 forward strand.
GRCh37:CM000673.1
About this gene
This gene has 24 transcripts (splice variants) and 14 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000389707.4 | ARNTL-001 | 2776 | 625aa | ENSP00000374357.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31430 | E9PKF0 E9PKG7 E9PKN1 E9PL54 E9PSD2 O00327 | NM_001178.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000389708.3 | ARNTL-202 | 2836 | 526aa | ENSP00000374358.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKF0 E9PKG7 E9PKN1 E9PL54 E9PSD2 F8W6J9 H0YER9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000401424.1 | ARNTL-003 | 2788 | 583aa | ENSP00000385915.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PI92 E9PPV4 E9PRB1 O00327 | NM_001030273.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000403290.1 | ARNTL-004 | 2746 | 626aa | ENSP00000384517.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKF0 E9PKG7 E9PKN1 E9PL54 E9PSD2 O00327 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000403510.3 | ARNTL-002 | 2745 | 582aa | ENSP00000385581.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44543 | E9PI92 E9PPV4 E9PRB1 O00327 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000396441.3 | ARNTL-203 | 2736 | 625aa | ENSP00000379718.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31430 | E9PKF0 E9PKG7 E9PKN1 E9PL54 E9PSD2 O00327 | NM_001030272.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000403482.3 | ARNTL-005 | 2389 | 624aa | ENSP00000385897.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O00327 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000361003.4 | ARNTL-201 | 2387 | 508aa | ENSP00000354278.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKF0 E9PKG7 E9PKN1 E9PL54 E9PSD2 O00327 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000530357.1 | ARNTL-018 | 868 | 141aa | ENSP00000436313.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PI92 E9PPV4 E9PRB1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000534544.1 | ARNTL-015 | 807 | 59aa | ENSP00000431566.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKN1 E9PSD2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000482049.1 | ARNTL-008 | 739 | 72aa | ENSP00000436721.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PI92 E9PRB1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000529388.1 | ARNTL-022 | 610 | 135aa | ENSP00000433571.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKF0 E9PKG7 E9PKN1 E9PL54 E9PSD2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000529050.1 | ARNTL-016 | 571 | 23aa | ENSP00000434044.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PSD2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000533520.1 | ARNTL-020 | 567 | 100aa | ENSP00000431488.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKG7 E9PKN1 E9PL54 E9PSD2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000529825.1 | ARNTL-017 | 551 | 46aa | ENSP00000434263.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PRB1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000527998.1 | ARNTL-019 | 519 | 76aa | ENSP00000433540.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKG7 E9PKN1 E9PSD2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000531665.1 | ARNTL-011 | 391 | 61aa | ENSP00000434781.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PNI4 E9PSD2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000524392.1 | ARNTL-014 | 1421 | 171aa | ENSP00000436442.1 | Nonsense mediated decay | H0YER9 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000497429.1 | ARNTL-007 | 764 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000472842.1 | ARNTL-006 | 3862 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000480685.1 | ARNTL-009 | 633 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000529390.1 | ARNTL-013 | 591 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000485918.2 | ARNTL-021 | 457 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000534102.1 | ARNTL-012 | 418 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
