Description
Rap guanine nucleotide exchange factor (GEF) 3 [Source:HGNC Symbol;Acc:16629]
Gene Synonyms
CAMP-GEFI, CGEF1, EPAC, EPAC1, HSU79275, bcm910, cAMP-GEFI
Location
Chromosome 12: 48,128,455-48,164,823 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 21 transcripts (splice variants) and 9 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000449771.2 | RAPGEF3-001 | 3370 | 923aa | ENSP00000395708.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41775 | B3KP15 F8VXK1 F8W0N0 O95398 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000405493.2 | RAPGEF3-202 | 5751 | 881aa | ENSP00000384521.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31784 | B3KP15 F8VXK1 F8W0N0 O95398 | NM_006105.5 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000395358.3 | RAPGEF3-003 | 4092 | 598aa | ENSP00000378764.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VXK1 F8W0N0 O95398 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000171000.4 | RAPGEF3-201 | 3604 | 881aa | ENSP00000171000.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31784 | B3KP15 F8VXK1 F8W0N0 O95398 | NM_001098531.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000389212.3 | RAPGEF3-017 | 3294 | 923aa | ENSP00000373864.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41775 | B3KP15 F8VXK1 F8W0N0 O95398 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000549151.1 | RAPGEF3-018 | 3265 | 881aa | ENSP00000448619.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31784 | B3KP15 F8VXK1 F8W0N0 O95398 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000548919.1 | RAPGEF3-007 | 2776 | 814aa | ENSP00000448480.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VRX1 F8VXK1 F8W0N0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000466322.1 | RAPGEF3-012 | 855 | 222aa | ENSP00000446731.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VXK1 F8W0N0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000495953.2 | RAPGEF3-013 | 648 | 141aa | ENSP00000448804.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VXK1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000547856.1 | RAPGEF3-016 | 2659 | 79aa | ENSP00000449905.1 | Nonsense mediated decay | F8VVJ6 | - | - | |
| ENST00000495465.2 | RAPGEF3-019 | 910 | 108aa | ENSP00000449818.1 | Nonsense mediated decay | H0YIP6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000548434.1 | RAPGEF3-014 | 695 | 184aa | ENSP00000447691.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000549347.1 | RAPGEF3-015 | 573 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000479866.1 | RAPGEF3-004 | 3917 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000482843.1 | RAPGEF3-005 | 3395 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000395360.2 | RAPGEF3-002 | 2325 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000488250.1 | RAPGEF3-006 | 1947 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476259.1 | RAPGEF3-009 | 824 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494764.1 | RAPGEF3-011 | 783 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000473777.1 | RAPGEF3-008 | 726 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000490387.1 | RAPGEF3-010 | 699 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
