Gene: SEPSECS ENSG00000109618

Description

Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:HGNC Symbol;Acc:30605]

Gene Synonyms

LP, PCH2D, SLA, SLA/LP, TRNP48

Location

Chromosome 4: 25,121,627-25,162,204 reverse strand.

GRCh37:CM000666.1

About this gene

This gene has 8 transcripts (splice variants) and is associated with 5 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382103.2	SEPSECS-001	5496	501aa	ENSP00000371535.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3432	A1A4F3 Q9HD40	NM_016955.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000302922.3	SEPSECS-201	5490	422aa	ENSP00000305956.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9HD40	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000513285.1	SEPSECS-004	561	177aa	ENSP00000423361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R969	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000358971.3	SEPSECS-003	3344	112aa	ENSP00000351857.3	Nonsense mediated decay		J3KP25	-	-
ENST00000514585.1	SEPSECS-002	1494	47aa	ENSP00000421880.1	Nonsense mediated decay		Q9HD40	-	-
ENST00000503150.1	SEPSECS-006	544	95aa	ENSP00000423850.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000515272.1	SEPSECS-007	529	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505513.1	SEPSECS-005	420	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: SEPSECS ENSG00000109618

Summary