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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RCL1 ENSG00000120158

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Description

RNA terminal phosphate cyclase-like 1 [Source:HGNC Symbol;Acc:17687]

Gene Synonyms

RNAC, RPC2, RPCL1, RTC2

Location

Chromosome 9: 4,792,869-4,885,917 forward strand.

GRCh37:CM000671.1

About this gene

This gene has 9 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381750.4	RCL1-001	2134	373aa	ENSP00000371169.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6456	Q5VZU3 Q9Y2P8	NM_005772.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000442869.1	RCL1-003	956	182aa	ENSP00000412000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VZU3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000448872.2	RCL1-201	820	187aa	ENSP00000388096.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69565	Q5VZU1 Q5VZU2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381732.3	RCL1-004	804	175aa	ENSP00000371151.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VYW8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381730.1	RCL1-002	801	187aa	ENSP00000371149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69565	Q5VZU1 Q5VZU2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381728.1	RCL1-006	758	187aa	ENSP00000371147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69565	Q5VZU1 Q5VZU2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000441844.1	RCL1-007	497	137aa	ENSP00000413381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VZU2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000445485.1	RCL1-008	1878	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473230.1	RCL1-005	441	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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