Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ALOX15B ENSG00000179593

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Description

arachidonate 15-lipoxygenase, type B [Source:HGNC Symbol;Acc:434]

Gene Synonyms

15-LOX-2

Location

Chromosome 17: 7,942,335-7,952,452 forward strand.

GRCh37:CM000679.1

About this gene

This gene has 5 transcripts (splice variants) and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380183.4	ALOX15B-001	2739	676aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11128	O15296	NM_001141.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000380173.2	ALOX15B-201	2605	647aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32558	O15296	NM_001039131.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000572022.1	ALOX15B-002	2396	664aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1D5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000573359.1	ALOX15B-005	1809	602aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32559	O15296	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000571240.1	ALOX15B-004	2944	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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Name

ALOX15B (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: O15296

CCDS

This gene is a member of the Human CCDS set: CCDS11128.1, CCDS32558.1, CCDS32559.1

Ensembl version

ENSG00000179593.11

Other assemblies

This gene maps to 8,039,017-8,049,134 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000108181 (version 3)

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The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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