Description
tet methylcytosine dioxygenase 2 [Source:HGNC Symbol;Acc:25941]
Gene Synonyms
FLJ20032, KIAA1546, MDS
Location
Chromosome 4: 106,067,032-106,200,973 forward strand.
GRCh37:CM000666.1
About this gene
This gene has 11 transcripts (splice variants), 2 paralogues and is associated with 110 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000540549.1 | TET2-202 | 10166 | 2002aa | ENSP00000442788.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47120 | D6RE87 E7EPB1 Q6N021 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000513237.1 | TET2-003 | 10166 | 2023aa | ENSP00000425443.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RE87 E7EPB1 E7EQS8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000545826.1 | TET2-203 | 10075 | 1194aa | ENSP00000442867.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RE87 Q6N021 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000380013.4 | TET2-002 | 9679 | 2002aa | ENSP00000369351.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47120 | D6RE87 E7EPB1 Q6N021 | NM_001127208.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000305737.2 | TET2-001 | 9233 | 1165aa | ENSP00000306705.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3666 | D6RE87 Q6N021 | NM_017628.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000394764.1 | TET2-201 | 9215 | 1165aa | ENSP00000378245.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3666 | D6RE87 Q6N021 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000413648.2 | TET2-004 | 4973 | 1167aa | ENSP00000391448.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RE87 E7EPB1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000514870.1 | TET2-006 | 865 | 110aa | ENSP00000426885.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RE87 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000265149.5 | TET2-005 | 9588 | 1194aa | ENSP00000265149.5 | Nonsense mediated decay | D6RE87 Q6N021 | - | - | |
| ENST00000504042.1 | TET2-007 | 455 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000505801.1 | TET2-008 | 391 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
