Human (GRCh37.p13)
Description

agrin [Source:HGNC Symbol;Acc:329]

Gene Synonyms

AGRIN

Location

Chromosome 1: 955,503-991,496 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 9 transcripts (splice variants), 3 paralogues and is associated with 3 phenotypes.

Show/hide columns (1 hidden)
  • Transcript ID
  • Name
  • bp
  • Protein
  • Translation ID
  • Biotype
  • CCDS
  • UniProt Match
  • RefSeq
  • Flags
Transcript IDNamebpProteinBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000379370.2AGRN-00173232045aa
 
Protein coding
CCDS30551O00468 Q5XG79 NM_198576.3Ensembl CanonicalGENCODE Basic
ENST00000419249.1AGRN-009813271aa
 
Protein coding
--CDS 5' and 3' incomplete
ENST00000477585.1AGRN-002707No protein
 
Processed transcript
---
ENST00000461111.1AGRN-0083385No protein
 
Retained intron
---
ENST00000469403.1AGRN-003899No protein
 
Retained intron
---
ENST00000492947.1AGRN-007690No protein
 
Retained intron
---
ENST00000479707.1AGRN-004584No protein
 
Retained intron
---
ENST00000466223.1AGRN-005459No protein
 
Retained intron
---
ENST00000478677.1AGRN-006276No protein
 
Retained intron
---
Name

AGRN (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: O00468

CCDS

This gene is a member of the Human CCDS set: CCDS30551.1

LRG

LRG_198 provides a stable genomic reference framework for describing sequence variants for this gene

Ensembl version

ENSG00000188157.9

Other assemblies

This gene maps to 1,020,123-1,056,116 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:
OTTHUMG00000040778 (version 3)

Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Contigs

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