Description
TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa [Source:HGNC Symbol;Acc:11534]
Gene Synonyms
MGC:39976, SL1, TAFI110, TAFI95
Location
Chromosome 16: 84,211,458-84,220,669 reverse strand.
GRCh37:CM000678.1
About this gene
This gene has 24 transcripts (splice variants).
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000567759.1 | TAF1C-001 | 3879 | 869aa | ENSP00000455265.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32496 | H3BNH3 H3BQZ8 Q15572 | NM_005679.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000378541.4 | TAF1C-201 | 3693 | 869aa | ENSP00000367802.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32496 | H3BNH3 H3BQZ8 Q15572 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000541676.1 | TAF1C-202 | 3682 | 776aa | ENSP00000437900.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H647 H3BQZ8 | NM_139353.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000341690.6 | TAF1C-005 | 3678 | 775aa | ENSP00000345305.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45535 | H3BQZ8 Q15572 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000566732.1 | TAF1C-002 | 2972 | 843aa | ENSP00000455933.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58489 | F5H647 H3BNH3 H3BQZ8 Q15572 | NM_001243156.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000570117.1 | TAF1C-003 | 2349 | 537aa | ENSP00000455247.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58488 | Q15572 | NM_001243158.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000568265.1 | TAF1C-021 | 1140 | 380aa | ENSP00000456101.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000564345.1 | TAF1C-011 | 602 | 146aa | ENSP00000454854.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BNH3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000561955.1 | TAF1C-015 | 570 | 93aa | ENSP00000456011.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQZ8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000564454.1 | TAF1C-014 | 555 | 136aa | ENSP00000457883.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BUZ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566903.1 | TAF1C-010 | 2628 | 209aa | ENSP00000456133.1 | Nonsense mediated decay | H3BNH3 H3BR91 | - | - | |
| ENST00000563428.1 | TAF1C-007 | 2531 | 58aa | ENSP00000455787.1 | Nonsense mediated decay | H3BQH8 | - | - | |
| ENST00000569505.1 | TAF1C-017 | 564 | 70aa | ENSP00000457281.1 | Nonsense mediated decay | H3BTQ6 | - | - | |
| ENST00000569609.1 | TAF1C-013 | 555 | 52aa | ENSP00000454494.1 | Nonsense mediated decay | H3BMQ4 | - | - | |
| ENST00000565544.1 | TAF1C-012 | 578 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000564774.1 | TAF1C-008 | 4637 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000564208.1 | TAF1C-004 | 3810 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000544090.1 | TAF1C-006 | 2747 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000537450.1 | TAF1C-009 | 1318 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000562330.1 | TAF1C-018 | 1044 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000565279.1 | TAF1C-016 | 912 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000570270.1 | TAF1C-022 | 597 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000566183.1 | TAF1C-019 | 290 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000562445.1 | TAF1C-020 | 259 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
