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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PANK4 ENSG00000157881

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Description

pantothenate kinase 4 [Source:HGNC Symbol;Acc:19366]

Gene Synonyms

FLJ10782

Location

Chromosome 1: 2,439,972-2,458,039 reverse strand.

GRCh37:CM000663.1

About this gene

This gene has 12 transcripts (splice variants), 3 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378466.3	PANK4-001	2649	773aa	ENSP00000367727.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42	Q9NVE7	NM_018216.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000435556.3	PANK4-008	2524	734aa	ENSP00000421433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHT6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000505228.1	PANK4-009	1913	473aa	ENSP00000425932.1	Nonsense mediated decay		H0Y9E4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000502770.1	PANK4-007	1041	151aa	ENSP00000425674.1	Nonsense mediated decay		D6RJF3	-	-
ENST00000486396.1	PANK4-005	879	41aa	ENSP00000425668.1	Nonsense mediated decay		H0YA02	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000502512.1	PANK4-012	706	136aa	ENSP00000423920.1	Nonsense mediated decay		H0Y9E4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000468002.2	PANK4-004	670	190aa	ENSP00000425977.1	Nonsense mediated decay		H0YA31	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000491212.1	PANK4-006	725	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471361.1	PANK4-003	722	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487804.1	PANK4-002	718	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514922.1	PANK4-010	568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515423.1	PANK4-011	430	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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