Description
retinoblastoma binding protein 4 [Source:HGNC Symbol;Acc:9887]
Gene Synonyms
NURF55, RBAP48, RbAp48
Location
Chromosome 1: 33,116,743-33,151,812 forward strand.
GRCh37:CM000663.1
About this gene
This gene has 20 transcripts (splice variants) and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000373493.5 | RBBP4-001 | 7943 | 425aa | ENSP00000362592.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS366 | B4DRT0 C9JPP3 E9PND5 H0YCT5 Q09028 | NM_005610.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000414241.3 | RBBP4-011 | 1788 | 424aa | ENSP00000398242.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44105 | B4DRT0 C9JPP3 E9PND5 H0YCT5 Q09028 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000458695.2 | RBBP4-003 | 1674 | 390aa | ENSP00000396057.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44106 | B4DRT0 C9JPP3 E9PND5 H0YCT5 Q09028 | NM_001135256.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000544435.1 | RBBP4-201 | 1547 | 173aa | ENSP00000442384.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DRT0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000373485.1 | RBBP4-002 | 1417 | 410aa | ENSP00000362584.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JPP3 E9PND5 Q09028 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000463378.1 | RBBP4-008 | 882 | 262aa | ENSP00000433805.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000490500.1 | RBBP4-004 | 632 | 68aa | ENSP00000437210.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PND5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000475321.1 | RBBP4-007 | 619 | 207aa | ENSP00000436986.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000482190.1 | RBBP4-010 | 616 | 167aa | ENSP00000436565.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YEU5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000445722.2 | RBBP4-013 | 580 | 87aa | ENSP00000389437.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JPP3 E9PND5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000492348.2 | RBBP4-019 | 1547 | 87aa | ENSP00000436663.1 | Nonsense mediated decay | E9PIC4 | - | - | |
| ENST00000460669.1 | RBBP4-009 | 783 | 180aa | ENSP00000432298.1 | Nonsense mediated decay | B4DRT0 H0YCT5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000527118.1 | RBBP4-014 | 700 | 62aa | ENSP00000432780.1 | Nonsense mediated decay | E9PNS2 | - | - | |
| ENST00000526193.1 | RBBP4-016 | 568 | 87aa | ENSP00000434925.1 | Nonsense mediated decay | E9PIC4 | - | - | |
| ENST00000477563.2 | RBBP4-006 | 544 | 104aa | ENSP00000432774.1 | Nonsense mediated decay | E9PND5 E9PNS6 | - | - | |
| ENST00000524393.1 | RBBP4-015 | 583 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000401893.3 | RBBP4-017 | 762 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000465780.1 | RBBP4-005 | 690 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000525506.1 | RBBP4-020 | 501 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000531983.1 | RBBP4-018 | 473 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
