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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SGPL1 ENSG00000166224

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Description

sphingosine-1-phosphate lyase 1 [Source:HGNC Symbol;Acc:10817]

Gene Synonyms

KIAA1252, S1PL, SPL

Location

Chromosome 10: 72,575,717-72,640,930 forward strand.

GRCh37:CM000672.1

About this gene

This gene has 4 transcripts (splice variants) and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373202.3	SGPL1-001	5745	568aa	ENSP00000362298.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31216	O95470	NM_003901.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000299297.4	SGPL1-004	658	202aa	ENSP00000299297.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BXL7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000409118.2	SGPL1-006	462	135aa	ENSP00000386549.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486993.1	SGPL1-002	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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