Description
cathepsin A [Source:HGNC Symbol;Acc:9251]
Gene Synonyms
GLB2, GSL, NGBE, PPCA, PPGB
Location
Chromosome 20: 44,518,783-44,527,459 forward strand.
GRCh37:CM000682.1
About this gene
This gene has 19 transcripts (splice variants), 1 paralogue and is associated with 5 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000372484.3 | CTSA-001 | 2149 | 498aa | ENSP00000361562.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13385 | Q59EV6 Q5JZG9 U3KQ41 U3KQF1 | NM_001127695.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000372459.2 | CTSA-012 | 1972 | 480aa | ENSP00000361537.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46609 | P10619 Q5JZG9 U3KQ41 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000191018.5 | CTSA-004 | 1898 | 480aa | ENSP00000191018.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46609 | P10619 Q5JZG9 U3KQ41 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000354880.5 | CTSA-006 | 1820 | 481aa | ENSP00000346952.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54467 | U3KQF1 | NM_001167594.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000419493.2 | CTSA-020 | 606 | 202aa | ENSP00000408533.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JZH0 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000607482.1 | CTSA-016 | 403 | 109aa | ENSP00000475524.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U3KQ41 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000606788.1 | CTSA-023 | 3056 | 231aa | ENSP00000476235.1 | Nonsense mediated decay | U3KQ41 U3KQF1 U3KQU6 | - | - | |
| ENST00000606394.1 | CTSA-018 | 584 | 82aa | ENSP00000475827.1 | Nonsense mediated decay | U3KQF1 | - | - | |
| ENST00000484855.2 | CTSA-010 | 2183 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000493522.2 | CTSA-008 | 901 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000485627.1 | CTSA-007 | 695 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000606000.1 | CTSA-022 | 644 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000606066.1 | CTSA-014 | 603 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000607212.1 | CTSA-017 | 590 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000607814.1 | CTSA-015 | 584 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000606782.1 | CTSA-019 | 582 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000607841.1 | CTSA-013 | 571 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000480961.1 | CTSA-009 | 513 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000607187.1 | CTSA-021 | 509 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
