Gene: COL4A6 ENSG00000197565

Description

collagen, type IV, alpha 6 [Source:HGNC Symbol;Acc:2208]

Gene Synonyms

CXDELq22.3, DELXq22.3

Location

Chromosome X: 107,386,780-107,682,727 reverse strand.

GRCh37:CM000685.1

About this gene

This gene has 10 transcripts (splice variants), 136 orthologues, 37 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372216.4	COL4A6-001	6570	1691aa	ENSP00000361290.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14541	B4DU54 Q14031	NM_001847.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000334504.7	COL4A6-002	6700	1690aa	ENSP00000334733.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14542	B4DU54 Q14031	NM_033641.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000394872.2	COL4A6-201	6700	1691aa	ENSP00000378340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MXH5 B4DU54	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000545689.1	COL4A6-204	6086	1666aa	ENSP00000443707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DU54 F5H851	NM_001287759.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538570.1	COL4A6-203	5987	1633aa	ENSP00000445236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DU54 F5H3Q5	NM_001287760.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000418180.1	COL4A6-202	1031	260aa	ENSP00000406002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZ39	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000461897.1	COL4A6-004	1889	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477085.1	COL4A6-003	1784	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487645.1	COL4A6-006	812	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468338.1	COL4A6-005	865	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Favourite species

All species

Recent locations

Gene: COL4A6 ENSG00000197565

Summary