Description
Rap guanine nucleotide exchange factor (GEF) 1 [Source:HGNC Symbol;Acc:4568]
Gene Synonyms
C3G, GRF2, RAPGEF1
Location
Chromosome 9: 134,452,157-134,615,461 reverse strand.
GRCh37:CM000671.1
About this gene
This gene has 8 transcripts (splice variants), 228 orthologues and 24 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000372190.3 | RAPGEF1-201 | 6173 | 1095aa | ENSP00000361264.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS48048 | Q13905 Q5JUE5 | NM_198679.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000372195.1 | RAPGEF1-002 | 6256 | 1094aa | ENSP00000361269.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q68DL3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000372189.3 | RAPGEF1-001 | 6085 | 1077aa | ENSP00000361263.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS48047 | Q13905 | NM_005312.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000414781.1 | RAPGEF1-006 | 957 | 319aa | ENSP00000407210.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000427994.1 | RAPGEF1-004 | 739 | 193aa | ENSP00000402174.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JUE5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000419442.1 | RAPGEF1-007 | 683 | 228aa | ENSP00000394296.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000438647.1 | RAPGEF1-003 | 588 | 158aa | ENSP00000410640.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JUE9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000481260.1 | RAPGEF1-008 | 1034 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
