Gene: OPN4 ENSG00000122375

Description

opsin 4 [Source:HGNC Symbol;Acc:14449]

Gene Synonyms

MOP, melanopsin

Location

GRCh37:CM000672.1

About this gene

This gene has 3 transcripts (splice variants) and 9 paralogues.

Transcripts

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372071.2	OPN4-201	2401	489aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31237	Q9UHM6	NM_001030015.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000241891.5	OPN4-001	2308	478aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7376	Q9UHM6	NM_033282.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000443292.1	OPN4-002	1653	495aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWU6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Name

OPN4 (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q9UHM6

CCDS

This gene is a member of the Human CCDS set: CCDS31237.1, CCDS7376.1

Ensembl version

ENSG00000122375.7

Other assemblies

This gene maps to 86,654,557-86,666,848 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000018654 (version 2)

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