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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: GBGT1 ENSG00000148288

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Description

globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:20460]

Gene Synonyms

A3GALNT, FS, MGC44848, UDP-GalNAc, UNQ2513

Location

Chromosome 9: 136,028,340-136,039,332 reverse strand.

GRCh37:CM000671.1

About this gene

This gene has 8 transcripts (splice variants), 344 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372040.3	GBGT1-001	1980	347aa	ENSP00000361110.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6960	J7PW20 J7Q0Z1 Q8N5D6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372043.3	GBGT1-002	1935	294aa	ENSP00000361113.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65176	Q8N5D6	NM_021996.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000540636.1	GBGT1-201	1449	330aa	ENSP00000437663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65175	B7Z8S5	NM_001282632.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372036.3	GBGT1-006	871	72aa	ENSP00000361106.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7U8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372038.3	GBGT1-005	847	160aa	ENSP00000361108.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7V0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000472281.1	GBGT1-004	2948	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470431.1	GBGT1-003	2870	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487864.1	GBGT1-007	630	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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