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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHI3L2 ENSG00000064886

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Description

chitinase 3-like 2 [Source:HGNC Symbol;Acc:1933]

Gene Synonyms

CHIL2, YKL-39, YKL39

Location

Chromosome 1: 111,743,393-111,786,062 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 17 transcripts (splice variants) and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000445067.2	CHI3L2-001	2169	390aa	ENSP00000437082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30802	E9PIX1 E9PPX4 E9PR52 E9PRL9 Q15782	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000466741.1	CHI3L2-002	1518	311aa	ENSP00000437086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41367	E9PPX4 E9PRL9 Q15782	NM_001025199.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000369744.2	CHI3L2-004	1489	380aa	ENSP00000358759.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30803	E9PPX4 E9PRL9 Q15782	NM_001025197.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000369748.4	CHI3L2-201	1468	390aa	ENSP00000358763.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30802	E9PIX1 E9PPX4 E9PR52 E9PRL9 Q15782	NM_004000.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000524472.1	CHI3L2-012	1435	311aa	ENSP00000432049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41367	E9PPX4 E9PRL9 Q15782	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000528451.1	CHI3L2-016	946	220aa	ENSP00000436077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIX1 E9PR52 E9PRL9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000486561.2	CHI3L2-015	914	201aa	ENSP00000431968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIX1 E9PRL9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497220.1	CHI3L2-007	778	183aa	ENSP00000435250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YE91	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000477185.2	CHI3L2-003	757	169aa	ENSP00000436272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPX4 E9PRL9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467038.2	CHI3L2-009	732	145aa	ENSP00000431978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PII8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474304.2	CHI3L2-008	600	182aa	ENSP00000436380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PP75	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497587.2	CHI3L2-011	589	122aa	ENSP00000436006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRL9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533831.2	CHI3L2-017	482	161aa	ENSP00000433176.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000472825.2	CHI3L2-010	339	42aa	ENSP00000435935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YEJ1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000529459.1	CHI3L2-014	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526684.1	CHI3L2-013	541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530597.1	CHI3L2-005	467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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