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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VTCN1 ENSG00000134258

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Description

V-set domain containing T cell activation inhibitor 1 [Source:HGNC Symbol;Acc:28873]

Gene Synonyms

B7-H4, B7H4, B7S1, B7X, B7h.5, FLJ22418, PRO1291, VCTN1

Location

Chromosome 1: 117,686,209-117,753,556 reverse strand.

GRCh37:CM000663.1

About this gene

This gene has 6 transcripts (splice variants), 193 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369458.3	VTCN1-001	2612	282aa	ENSP00000358470.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS894	Q7Z7D3	NM_024626.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000359008.4	VTCN1-002	2581	285aa	ENSP00000351899.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T2L0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000328189.3	VTCN1-201	2257	166aa	ENSP00000328168.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58020	Q7Z7D3	NM_001253850.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000539893.1	VTCN1-202	1441	187aa	ENSP00000444724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58019	Q7Z7D3	NM_001253849.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000463461.1	VTCN1-003	768	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488493.1	VTCN1-004	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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