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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PIP5K1A ENSG00000143398

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Description

phosphatidylinositol-4-phosphate 5-kinase, type I, alpha [Source:HGNC Symbol;Acc:8994]

Location

Chromosome 1: 151,170,425-151,222,012 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 18 transcripts (splice variants) and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368888.4	PIP5K1A-003	2134	562aa	ENSP00000357883.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44219	A6PW58 P78517 Q99755	NM_001135638.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000349792.5	PIP5K1A-001	3767	549aa	ENSP00000271663.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS990	P78517 Q99755	-	-
ENST00000409426.1	PIP5K1A-015	3737	550aa	ENSP00000386432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PW57 P78517	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000368890.4	PIP5K1A-002	3613	500aa	ENSP00000357885.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44221	Q99755	NM_001135637.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000441902.2	PIP5K1A-016	2297	522aa	ENSP00000415648.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44220	Q99755	NM_001135636.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000414290.2	PIP5K1A-201	1252	198aa	ENSP00000388800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DY52	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000424999.1	PIP5K1A-014	567	41aa	ENSP00000392780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PW56	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447555.1	PIP5K1A-011	373	101aa	ENSP00000401228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A5X0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418435.1	PIP5K1A-004	353	86aa	ENSP00000414632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PW58	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000454769.2	PIP5K1A-017	540	39aa	ENSP00000416196.2	Nonsense mediated decay		E9PSF8	-	-
ENST00000464105.1	PIP5K1A-007	653	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486048.2	PIP5K1A-012	508	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489625.1	PIP5K1A-010	955	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468772.1	PIP5K1A-005	710	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486866.1	PIP5K1A-008	600	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460157.1	PIP5K1A-013	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481713.1	PIP5K1A-006	474	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461816.1	PIP5K1A-009	449	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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