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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNX27 ENSG00000143376

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Description

sorting nexin family member 27 [Source:HGNC Symbol;Acc:20073]

Gene Synonyms

KIAA0488, MGC20471, MRT1, MY014

Location

Chromosome 1: 151,584,541-151,671,567 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 5 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368843.3	SNX27-001	7197	528aa	ENSP00000357836.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1001	Q96L92	NM_030918.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000458013.2	SNX27-003	6403	541aa	ENSP00000400333.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96L92	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000368838.1	SNX27-004	1308	435aa	ENSP00000357831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96L92	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000368841.2	SNX27-002	7070	65aa	ENSP00000357834.2	Nonsense mediated decay		H7C603	-	-
ENST00000482791.1	SNX27-005	491	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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