Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PCMT1 ENSG00000120265

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Description

protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:HGNC Symbol;Acc:8728]

Gene Synonyms

PIMT

Location

Chromosome 6: 150,070,579-150,132,556 forward strand.

GRCh37:CM000668.1

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367384.2	PCMT1-001	1938	286aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59041	C9J0F2 H7BY58	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000464889.1	PCMT1-002	1984	285aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5219	C9J0F2 J3KP72	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000367380.5	PCMT1-201	1733	227aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0F2 P22061	NM_005389.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000367378.1	PCMT1-004	1293	285aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5219	C9J0F2 J3KP72	NM_001252053.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544496.1	PCMT1-202	930	192aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z972	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000495487.1	PCMT1-008	548	96aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0F2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484601.1	PCMT1-003	1095	124aa	Nonsense mediated decay		F8WAV5	-	-
ENST00000486585.1	PCMT1-007	801	67aa	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000494411.1	PCMT1-009	600	130aa	Nonsense mediated decay		F8WAX2	-	-
ENST00000460828.1	PCMT1-006	582	120aa	Nonsense mediated decay		F8WDT3	-	-
ENST00000480010.1	PCMT1-005	377	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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