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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: GALNT2 ENSG00000143641

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Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) [Source:HGNC Symbol;Acc:4124]

Gene Synonyms

GalNAc-T2

Location

Chromosome 1: 230,193,536-230,417,870 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 7 transcripts (splice variants), 209 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366672.4	GALNT2-001	4454	571aa	ENSP00000355632.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1582	Q10471	NM_004481.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000543760.1	GALNT2-202	2239	533aa	ENSP00000445017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1S6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000541865.1	GALNT2-201	1341	265aa	ENSP00000444346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z8V8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000485438.1	GALNT2-002	4030	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492568.1	GALNT2-003	2766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494106.1	GALNT2-004	692	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488903.1	GALNT2-005	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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