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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CNOT7 ENSG00000198791

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Description

CCR4-NOT transcription complex, subunit 7 [Source:HGNC Symbol;Acc:14101]

Gene Synonyms

CAF1, Caf1a, hCAF-1

Location

Chromosome 8: 17,086,737-17,104,387 reverse strand.

GRCh37:CM000670.1

About this gene

This gene has 12 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361272.4	CNOT7-001	2649	285aa	ENSP00000355279.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6000	E5RGH2 E5RJE0 Q9UIV1	NM_013354.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000523917.1	CNOT7-002	1885	244aa	ENSP00000429093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55202	E5RGH2 E5RJE0 Q9UIV1	NM_054026.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000524358.1	CNOT7-007	700	147aa	ENSP00000430160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGH2 E5RJE0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519918.1	CNOT7-011	680	208aa	ENSP00000428147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000520178.1	CNOT7-008	568	40aa	ENSP00000429079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJE0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518541.1	CNOT7-012	426	91aa	ENSP00000430263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519954.1	CNOT7-006	1209	51aa	ENSP00000429632.1	Nonsense mediated decay		E5RHV9	-	-
ENST00000518021.1	CNOT7-005	768	62aa	ENSP00000428783.1	Nonsense mediated decay		E5RGA8	-	-
ENST00000518885.1	CNOT7-009	477	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519998.1	CNOT7-003	1909	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523649.1	CNOT7-004	699	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522062.1	CNOT7-010	444	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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