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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NLGN1 ENSG00000169760

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Description

neuroligin 1 [Source:HGNC Symbol;Acc:14291]

Gene Synonyms

KIAA1070, NL1, NLGN1

Location

Chromosome 3: 173,114,074-174,004,434 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 12 transcripts (splice variants) and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000457714.1	NLGN1-001	8242	823aa	ENSP00000392500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3222	Q8N2Q7	NM_014932.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000361589.4	NLGN1-002	5092	823aa	ENSP00000354541.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3222	Q8N2Q7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000545397.1	NLGN1-202	2719	823aa	ENSP00000441108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3222	Q8N2Q7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000401917.3	NLGN1-201	2592	863aa	ENSP00000385750.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4D3 D2X2H5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000415045.1	NLGN1-003	1536	367aa	ENSP00000410374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4D3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000423427.1	NLGN1-005	771	13aa	ENSP00000407255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413821.1	NLGN1-007	635	10aa	ENSP00000401843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000466350.1	NLGN1-010	861	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482120.1	NLGN1-009	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469727.1	NLGN1-006	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469564.1	NLGN1-011	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490929.1	NLGN1-008	432	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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