Description
solute carrier family 6 (neurotransmitter transporter), member 12 [Source:HGNC Symbol;Acc:11045]
Gene Synonyms
BGT-1, BGT1, GAT2
Location
Chromosome 12: 299,243-323,736 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 17 transcripts (splice variants) and 12 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000428720.1 | SLC6A12-202 | 3571 | 614aa | ENSP00000388184.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8501 | B3KTU1 F5H2T6 P48065 | NM_001122848.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000424061.2 | SLC6A12-002 | 3332 | 614aa | ENSP00000399136.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8501 | B3KTU1 F5H2T6 P48065 | NM_003044.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397296.2 | SLC6A12-201 | 3285 | 614aa | ENSP00000380464.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8501 | B3KTU1 F5H2T6 P48065 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000359674.4 | SLC6A12-001 | 3165 | 614aa | ENSP00000352702.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8501 | B3KTU1 F5H2T6 P48065 | NM_001122847.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000536824.1 | SLC6A12-004 | 2101 | 614aa | ENSP00000444268.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8501 | B3KTU1 F5H2T6 P48065 | NM_001206931.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000537793.1 | SLC6A12-005 | 577 | 146aa | ENSP00000439351.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H2T6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000535347.1 | SLC6A12-008 | 554 | 81aa | ENSP00000446082.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H4L6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000538272.1 | SLC6A12-009 | 741 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000535498.1 | SLC6A12-011 | 574 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000536116.1 | SLC6A12-007 | 549 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000538424.1 | SLC6A12-006 | 467 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000545058.1 | SLC6A12-013 | 1992 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000542825.1 | SLC6A12-012 | 736 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000538580.1 | SLC6A12-010 | 665 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000537826.1 | SLC6A12-003 | 567 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000540094.1 | SLC6A12-015 | 557 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000544782.1 | SLC6A12-014 | 546 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
