Description
glutamate decarboxylase 1 (brain, 67kDa) [Source:HGNC Symbol;Acc:4092]
Gene Synonyms
CPSQ1, GAD, GAD67, SCP
Location
Chromosome 2: 171,669,723-171,717,661 forward strand.
GRCh37:CM000664.1
About this gene
This gene has 16 transcripts (splice variants), 5 paralogues and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000358196.3 | GAD1-001 | 3604 | 594aa | ENSP00000350928.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2239 | C9J6C9 C9JLZ7 C9JN45 C9JT43 Q09LL7 Q99259 | NM_000817.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000375272.1 | GAD1-201 | 1252 | 224aa | ENSP00000364421.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2240 | C9J6C9 C9JLZ7 C9JN45 C9JT43 Q99259 | NM_013445.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000344257.5 | GAD1-002 | 1029 | 224aa | ENSP00000341167.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2240 | C9J6C9 C9JLZ7 C9JN45 C9JT43 Q99259 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000445006.1 | GAD1-008 | 639 | 37aa | ENSP00000394948.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JN45 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000455008.1 | GAD1-009 | 571 | 115aa | ENSP00000405917.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J6C9 C9JLZ7 C9JN45 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000456864.1 | GAD1-010 | 556 | 121aa | ENSP00000394255.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J6C9 C9JLZ7 C9JN45 C9JT43 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000454603.1 | GAD1-007 | 529 | 85aa | ENSP00000402366.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JLZ7 C9JN45 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000486850.1 | GAD1-015 | 461 | 84aa | ENSP00000476147.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000493875.1 | GAD1-003 | 3988 | 425aa | ENSP00000434696.1 | Nonsense mediated decay | C9J6C9 C9JLZ7 C9JN45 C9JT43 Q49AK1 | - | - | |
| ENST00000414527.2 | GAD1-013 | 1780 | 233aa | ENSP00000403849.1 | Nonsense mediated decay | C9J6C9 C9JLZ7 C9JN45 C9JT43 F8WD43 | - | - | |
| ENST00000429023.1 | GAD1-004 | 812 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000478562.1 | GAD1-006 | 3172 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000488724.1 | GAD1-005 | 1256 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000493270.1 | GAD1-012 | 807 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000485013.1 | GAD1-011 | 578 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000462739.1 | GAD1-014 | 567 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
