Description
DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:HGNC Symbol;Acc:18682]
Gene Synonyms
DKFZp564O176, E4-DBP, FLJ30012, HQ0256, MSTP162, RRP3
Location
Chromosome 12: 12,966,250-12,982,915 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 12 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000358007.3 | DDX47-001 | 1817 | 455aa | ENSP00000350698.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8655 | A4UCU0 Q7Z4B1 Q9H0S4 | NM_016355.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000352940.4 | DDX47-002 | 1698 | 406aa | ENSP00000319578.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8656 | A4UCU0 Q9H0S4 | NM_201224.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000544400.1 | DDX47-009 | 597 | 196aa | ENSP00000444000.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H1N9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000392155.2 | DDX47-010 | 561 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000542832.1 | DDX47-011 | 554 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000542123.1 | DDX47-006 | 2689 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000545038.1 | DDX47-005 | 2357 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000541537.1 | DDX47-003 | 1517 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000544032.1 | DDX47-004 | 1044 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000544497.1 | DDX47-008 | 628 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000535722.1 | DDX47-012 | 586 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000426619.2 | DDX47-007 | 531 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
