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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RIMKLB ENSG00000166532

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Description

ribosomal modification protein rimK-like family member B [Source:HGNC Symbol;Acc:29228]

Gene Synonyms

FAM80B, KIAA1238, NAAGS, NAAGS-I

Location

Chromosome 12: 8,834,196-8,935,691 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 12 transcripts (splice variants), 147 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357529.3	RIMKLB-201	5830	386aa	ENSP00000350136.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41748	F5GZH5 F5H3V4 Q9ULI2	NM_020734.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538135.1	RIMKLB-004	5392	386aa	ENSP00000440943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41748	F5GZH5 F5H3V4 Q9ULI2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000535829.1	RIMKLB-001	2236	386aa	ENSP00000445863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41748	F5GZH5 F5H3V4 Q9ULI2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000537189.1	RIMKLB-009	560	170aa	ENSP00000444721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3V4 F5H552	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541044.1	RIMKLB-007	555	114aa	ENSP00000444445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZH5 F5H3V4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000539923.1	RIMKLB-008	481	95aa	ENSP00000439079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3V4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544257.1	RIMKLB-003	1589	307aa	ENSP00000438004.1	Nonsense mediated decay		F5GZH5 F5H3V4 Q9ULI2	-	-
ENST00000299673.5	RIMKLB-002	2033	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504495.2	RIMKLB-005	1893	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510357.2	RIMKLB-006	650	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000542232.2	RIMKLB-010	640	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538758.1	RIMKLB-011	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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