Description
regulation of nuclear pre-mRNA domain containing 1A [Source:HGNC Symbol;Acc:25560]
Gene Synonyms
FLJ10656, HsT3101, P15RS
Location
Chromosome 18: 33,564,350-33,647,539 reverse strand.
GRCh37:CM000680.1
About this gene
This gene has 13 transcripts (splice variants) and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000399022.4 | RPRD1A-001 | 4438 | 312aa | ENSP00000381984.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11917 | K7ER50 Q96P16 | NM_018170.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000590898.1 | RPRD1A-005 | 1945 | 276aa | ENSP00000467991.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ER50 Q96P16 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000357384.4 | RPRD1A-004 | 1850 | 312aa | ENSP00000349955.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11917 | K7ER50 Q96P16 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000585953.1 | RPRD1A-009 | 1648 | 123aa | ENSP00000467268.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000337059.5 | RPRD1A-202 | 1590 | 276aa | ENSP00000337476.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ER50 Q96P16 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000588737.1 | RPRD1A-002 | 1264 | 276aa | ENSP00000465444.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ER50 Q96P16 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000319040.6 | RPRD1A-201 | 1022 | 289aa | ENSP00000314602.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q96P16 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000587563.1 | RPRD1A-010 | 643 | 49aa | ENSP00000468108.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ER50 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000585879.1 | RPRD1A-011 | 425 | 4aa | ENSP00000468173.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000589050.1 | RPRD1A-003 | 1022 | 289aa | ENSP00000468209.1 | Non stop decay | Q96P16 | - | - | |
| ENST00000592674.1 | RPRD1A-007 | 566 | 73aa | ENSP00000467949.1 | Nonsense mediated decay | K7EQR8 | - | - | |
| ENST00000588459.1 | RPRD1A-008 | 576 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000591994.1 | RPRD1A-006 | 2484 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
