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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPRS ENSG00000105426

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Description

protein tyrosine phosphatase, receptor type, S [Source:HGNC Symbol;Acc:9681]

Gene Synonyms

PTPSIGMA

Location

Chromosome 19: 5,158,506-5,340,814 reverse strand.

GRCh37:CM000681.1

About this gene

This gene has 13 transcripts (splice variants) and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357368.4	PTPRS-204	7347	1948aa	ENSP00000349932.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45930	K7ERX4 K7ESP0 Q13332	NM_002850.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000372412.4	PTPRS-205	7350	1949aa	ENSP00000361489.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDC5 K7ERX4 K7ESP0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000262963.6	PTPRS-201	7287	1928aa	ENSP00000262963.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G8JL96 K7ERX4 K7ESP0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000348075.2	PTPRS-202	7233	1910aa	ENSP00000269907.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12140	K7ERX4 K7ESP0 Q13332	NM_130854.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000587303.1	PTPRS-002	6353	1948aa	ENSP00000467537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45930	K7ERX4 K7ESP0 Q13332	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000353284.2	PTPRS-203	6006	1501aa	ENSP00000327313.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12139	K7ERX4 K7ESP0 Q13332	NM_130855.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000588012.1	PTPRS-003	5993	1910aa	ENSP00000465443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12140	K7ERX4 K7ESP0 Q13332	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000592099.1	PTPRS-001	4766	1501aa	ENSP00000467398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12139	K7ERX4 K7ESP0 Q13332	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000590509.1	PTPRS-005	893	128aa	ENSP00000465185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ERX4 K7ESP0 Q8NHS7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000591760.1	PTPRS-006	478	90aa	ENSP00000468803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ERX4 K7ESP0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586065.1	PTPRS-007	388	79aa	ENSP00000468455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ERX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588552.1	PTPRS-004	5443	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589851.1	PTPRS-008	1270	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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