Description
calmodulin 1 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1442]
Gene Synonyms
CALM, CALM1, CALM3, CALML2, CAM, CAM1, CAMI, CAMII, CPVT4, DD132, PHKD, PHKD2, PHKD3, caM
Location
Chromosome 14: 90,862,846-90,874,605 forward strand.
GRCh37:CM000676.1
About this gene
This gene has 15 transcripts (splice variants), 12 paralogues and is associated with 5 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000356978.4 | CALM1-001 | 4242 | 149aa | ENSP00000349467.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9892 | B4DJ51 G3V361 P62158 Q96HY3 | NM_006888.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000447653.3 | CALM1-004 | 1104 | 150aa | ENSP00000403491.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ETZ0 G3V361 Q96HY3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000544280.2 | CALM1-006 | 1064 | 113aa | ENSP00000442853.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V361 Q96HY3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000553542.1 | CALM1-012 | 877 | 113aa | ENSP00000450829.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V361 Q96HY3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000557020.1 | CALM1-007 | 557 | 98aa | ENSP00000451062.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V361 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553630.1 | CALM1-003 | 1420 | 83aa | ENSP00000451646.1 | Nonsense mediated decay | F8WBR5 G3V479 | - | - | |
| ENST00000553422.1 | CALM1-013 | 438 | 76aa | ENSP00000450425.1 | Nonsense mediated decay | G3V226 | - | - | |
| ENST00000555132.1 | CALM1-016 | 554 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000553964.1 | CALM1-005 | 2670 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000556757.1 | CALM1-009 | 588 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000553995.1 | CALM1-010 | 583 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000557123.1 | CALM1-008 | 569 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000555267.1 | CALM1-011 | 554 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000554296.1 | CALM1-014 | 531 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000556721.1 | CALM1-015 | 444 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
