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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ZC3H7A ENSG00000122299

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Description

zinc finger CCCH-type containing 7A [Source:HGNC Symbol;Acc:30959]

Gene Synonyms

FLJ20318, HSPC055, ZC3H7, ZC3HDC7

Location

Chromosome 16: 11,844,442-11,891,123 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 17 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396516.2	ZC3H7A-003	3845	971aa	ENSP00000379773.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10550	I3L1Y3 I3L382 I3L3F9 I3L3S2 Q8IWR0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000355758.4	ZC3H7A-001	3825	971aa	ENSP00000347999.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10550	I3L1Y3 I3L382 I3L3F9 I3L3S2 Q8IWR0	NM_014153.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000575984.1	ZC3H7A-010	2632	167aa	ENSP00000459477.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IWR0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000571198.1	ZC3H7A-002	2343	733aa	ENSP00000459747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1Y3 I3L2K5 I3L382 I3L3F9 I3L3S2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576009.1	ZC3H7A-008	986	328aa	ENSP00000460122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L323	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000572870.1	ZC3H7A-006	663	152aa	ENSP00000460253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1Y3 I3L382 I3L3F9 I3L3S2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576018.1	ZC3H7A-014	575	77aa	ENSP00000459206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1Y3 I3L3F9 I3L3S2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000572781.1	ZC3H7A-012	564	70aa	ENSP00000460422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3F9 I3L3S2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574995.1	ZC3H7A-013	532	60aa	ENSP00000460679.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3S2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571405.1	ZC3H7A-004	1930	225aa	ENSP00000459811.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000575041.1	ZC3H7A-017	780	92aa	ENSP00000459458.1	Nonsense mediated decay		I3L282	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000575170.1	ZC3H7A-007	831	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000570918.1	ZC3H7A-016	1410	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000571676.1	ZC3H7A-015	859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000572938.1	ZC3H7A-009	655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576247.1	ZC3H7A-005	480	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570862.1	ZC3H7A-011	415	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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