Gene: OCLN ENSG00000197822

Description

occludin [Source:HGNC Symbol;Acc:8104]

Gene Synonyms

BLCPMG

Location

Chromosome 5: 68,788,119-68,853,931 forward strand.

GRCh37:CM000667.1

View alleles of this gene on alternative sequences

About this gene

This gene has 7 transcripts (splice variants), 1 gene allele and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355237.2	OCLN-001	6438	522aa	ENSP00000347379.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4006	Q16625	NM_002538.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000380766.2	OCLN-201	2218	468aa	ENSP00000370143.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q16625	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000396442.2	OCLN-002	1748	522aa	ENSP00000379719.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4006	Q16625	NM_001205254.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538151.1	OCLN-202	975	271aa	ENSP00000445940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54864	Q16625	NM_001205255.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000542132.1	OCLN-203	813	200aa	ENSP00000440000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q16625	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000514370.1	OCLN-003	958	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510666.1	OCLN-004	732	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Favourite species

All species

Recent locations

Gene: OCLN ENSG00000197822

Summary