Description
fibronectin 1 [Source:HGNC Symbol;Acc:3778]
Gene Synonyms
CIG, ED-B, FINC, FN, FNZ, GFND, GFND2, LETS, MSF
Location
Chromosome 2: 216,225,163-216,300,895 reverse strand.
GRCh37:CM000664.1
About this gene
This gene has 30 transcripts (splice variants), 8 paralogues and is associated with 5 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000354785.4 | FN1-001 | 8905 | 2477aa | ENSP00000346839.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42814 | A6YID6 P02751 Q53S27 Q7L553 Q9H382 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000323926.6 | FN1-002 | 8708 | 2446aa | ENSP00000323534.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6YID2 P02751 Q53S27 Q7L553 Q9H382 | NM_212482.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000359671.1 | FN1-204 | 8524 | 2386aa | ENSP00000352696.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6YID6 P02751 Q53S27 Q7L553 Q9H382 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000336916.4 | FN1-003 | 8435 | 2355aa | ENSP00000338200.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2399 | A6YID2 P02751 Q53S27 Q7L553 Q9H382 | NM_212478.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000421182.1 | FN1-005 | 8103 | 2240aa | ENSP00000394423.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P02751 Q14328 Q53S27 Q7L553 Q9H382 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000357009.2 | FN1-203 | 8025 | 2031aa | ENSP00000349509.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P02751 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000346544.3 | FN1-202 | 7999 | 2211aa | ENSP00000265312.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6YID5 F8W7G7 Q53S27 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000446046.1 | FN1-008 | 7952 | 2330aa | ENSP00000410422.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46510 | A6YID3 P02751 Q14328 Q53S27 Q7L553 Q9H382 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000345488.5 | FN1-201 | 7918 | 2184aa | ENSP00000273049.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P02751 Q53S27 Q9H382 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000357867.4 | FN1-004 | 7898 | 2176aa | ENSP00000350534.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2400 | P02751 Q53S27 Q7L553 Q9H382 | NM_212474.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000356005.4 | FN1-013 | 7846 | 2296aa | ENSP00000348285.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42813 | P02751 Q53S27 Q7L553 Q9H382 | NM_212476.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000443816.1 | FN1-009 | 7762 | 2265aa | ENSP00000415018.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6YID4 P02751 Q53S27 Q7L553 Q9H382 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000432072.2 | FN1-012 | 7759 | 2267aa | ENSP00000399538.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P02751 Q53S27 Q7L553 Q9H382 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000456923.1 | FN1-011 | 3720 | 1103aa | ENSP00000416139.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y7Z1 Q53S27 Q7L553 Q9H382 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000426059.1 | FN1-014 | 2388 | 657aa | ENSP00000398907.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46512 | - | NM_054034.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000438981.1 | FN1-026 | 723 | 241aa | ENSP00000392565.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y4K8 Q14328 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000490833.1 | FN1-028 | 699 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000492816.2 | FN1-007 | 9171 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000498719.1 | FN1-010 | 2433 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000474036.1 | FN1-027 | 1058 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460217.1 | FN1-025 | 804 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000496542.1 | FN1-032 | 695 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494446.1 | FN1-017 | 676 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000469569.1 | FN1-018 | 629 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000485567.1 | FN1-023 | 584 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000480024.1 | FN1-021 | 576 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461974.1 | FN1-022 | 571 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000473614.1 | FN1-019 | 568 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000471193.1 | FN1-031 | 496 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000480737.1 | FN1-024 | 384 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
