Description
transcription factor 4 [Source:HGNC Symbol;Acc:11634]
Gene Synonyms
BHLHB19, E2-2, ITF-2, ITF2, PTHS, SEF-2, SEF2, SEF2-1, SEF2-1A, SEF2-1B, SEF2-1D, TCF-4, bHLHb19
Location
Chromosome 18: 52,889,562-53,332,018 reverse strand.
GRCh37:CM000680.1
About this gene
This gene has 48 transcripts (splice variants), 2 paralogues and is associated with 8 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000398339.1 | TCF4-004 | 2478 | 773aa | ENSP00000381382.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58631 | E9PH57 G0LNT3 G0LNT4 G0LNT7 G0LNT8 H3BMC8 H3BME8 H3BNI2 H3BNZ2 H3BP59 H3BPG3 H3BRF7 H3BSX3 H3BT24 H3BTC3 H3BTM9 H3BUQ3 K7ERJ0 | NM_001243226.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000354452.3 | TCF4-201 | 8332 | 671aa | ENSP00000346440.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42438 | G0LNT3 G0LNT4 G0LNT7 G0LNT8 H3BMC8 H3BME8 H3BNI2 H3BNZ2 H3BP59 H3BPG3 H3BRF7 H3BSX3 H3BT24 H3BTC3 H3BTM9 H3BUQ3 K7ERJ0 P15884 | NM_001083962.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000356073.4 | TCF4-002 | 8317 | 667aa | ENSP00000348374.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11960 | G0LNT3 G0LNT4 G0LNT7 G0LNT8 G0LNV2 H3BMC8 H3BME8 H3BNI2 H3BNZ2 H3BP59 H3BPG3 H3BRF7 H3BSX3 H3BT24 H3BTC3 H3BTM9 H3BUQ3 K7ERJ0 P15884 | NM_003199.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000537578.1 | TCF4-003 | 2745 | 647aa | ENSP00000440731.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58629 | G0LNT3 G0LNT7 G0LNT8 H3BMC8 H3BME8 H3BNI2 H3BNZ2 H3BP59 H3BPG3 H3BRF7 H3BSX3 H3BT24 H3BTC3 H3BTM9 H3BUQ3 K7ERJ0 P15884 | NM_001243227.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000564403.2 | TCF4-019 | 2660 | 677aa | ENSP00000457263.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58630 | G0LNT3 G0LNT4 H3BMC8 H3BME8 H3BNI2 H3BP59 H3BRF7 H3BSX3 H3BTC3 H3BTP3 H3BUQ3 | NM_001243228.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000568740.1 | TCF4-005 | 2620 | 642aa | ENSP00000455346.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT3 G0LNT7 G0LNT8 G0LNV2 H3BME8 H3BNZ2 H3BPG3 H3BPJ7 H3BRF7 H3BSX3 H3BTM9 K7ERJ0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000540999.1 | TCF4-007 | 2572 | 643aa | ENSP00000445202.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT3 G0LNT7 G0LNT8 G0LNV2 H3BMC8 H3BME8 H3BNI2 H3BNZ2 H3BP59 H3BPG3 H3BRF7 H3BSX3 H3BT24 H3BTC3 H3BTM9 H3BUQ3 K7ERJ0 P15884 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000457482.3 | TCF4-015 | 2438 | 511aa | ENSP00000409447.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58624 | P15884 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000565018.2 | TCF4-001 | 2411 | 671aa | ENSP00000455984.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42438 | G0LNT3 G0LNT4 G0LNT7 G0LNT8 H3BMC8 H3BME8 H3BNI2 H3BNZ2 H3BP59 H3BPG3 H3BRF7 H3BSX3 H3BT24 H3BTC3 H3BTM9 H3BUQ3 K7ERJ0 P15884 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000568673.1 | TCF4-008 | 2403 | 647aa | ENSP00000455135.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58629 | G0LNT3 G0LNT7 G0LNT8 H3BMC8 H3BME8 H3BNI2 H3BNZ2 H3BP59 H3BPG3 H3BRF7 H3BSX3 H3BT24 H3BTC3 H3BTM9 H3BUQ3 K7ERJ0 P15884 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000564999.1 | TCF4-006 | 2401 | 667aa | ENSP00000457649.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11960 | G0LNT3 G0LNT4 G0LNT7 G0LNT8 G0LNV2 H3BMC8 H3BME8 H3BNI2 H3BNZ2 H3BP59 H3BPG3 H3BRF7 H3BSX3 H3BT24 H3BTC3 H3BTM9 H3BUQ3 K7ERJ0 P15884 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000543082.1 | TCF4-009 | 2396 | 625aa | ENSP00000439656.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58628 | G0LNT7 G0LNT8 G0LNV2 H3BNI2 H3BNZ2 H3BPG3 H3BRF7 H3BSX3 H3BTM9 K7ERJ0 P15884 | NM_001243231.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000544241.2 | TCF4-011 | 2264 | 600aa | ENSP00000441562.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58627 | G0LNT7 G0LNT8 H3BNZ2 H3BPG3 H3BRF7 H3BSX3 H3BTM9 K7ERJ0 P15884 | NM_001243232.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000561992.1 | TCF4-010 | 2184 | 537aa | ENSP00000455179.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58626 | G0LNT7 G0LNT8 G0LNV2 H3BNZ2 H3BPG3 H3BRF7 H3BSX3 H3BTM9 K7ERJ0 P15884 | NM_001243233.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000566279.1 | TCF4-045 | 2128 | 611aa | ENSP00000456125.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT3 H3BME8 P15884 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000566286.1 | TCF4-041 | 2119 | 664aa | ENSP00000455418.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59321 | G0LNT3 G0LNT5 G0LNT7 G0LNT8 H3BMC8 H3BME8 H3BNI2 H3BNZ2 H3BP59 H3BPG3 H3BRF7 H3BSX3 H3BT24 H3BTC3 H3BTM9 H3BUQ3 K7ERJ0 P15884 | NM_001243230.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000567880.1 | TCF4-046 | 1948 | 607aa | ENSP00000454366.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT3 G0LNU4 G0LNV2 H3BME8 P15884 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000537856.3 | TCF4-013 | 1929 | 537aa | ENSP00000439827.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58626 | G0LNT7 G0LNT8 G0LNV2 H3BNZ2 H3BPG3 H3BRF7 H3BSX3 H3BTM9 K7ERJ0 P15884 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000564228.1 | TCF4-042 | 1915 | 596aa | ENSP00000455261.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT7 G0LNT8 G0LNV2 H3BNZ2 H3BPG3 H3BRF7 H3BSX3 H3BTM9 K7ERJ0 P15884 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000570287.2 | TCF4-044 | 1896 | 507aa | ENSP00000455763.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58625 | G0LNV2 P15884 | NM_001243235.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000570177.2 | TCF4-012 | 1872 | 537aa | ENSP00000454647.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58626 | G0LNT7 G0LNT8 G0LNV2 H3BNZ2 H3BPG3 H3BRF7 H3BSX3 H3BTM9 K7ERJ0 P15884 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000561831.3 | TCF4-016 | 1823 | 507aa | ENSP00000457765.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58623 | G0LNV2 P15884 | NM_001243236.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000568169.1 | TCF4-021 | 870 | 280aa | ENSP00000457392.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT1 G0LNT3 G0LNT7 G0LNT8 H3BMC8 H3BME8 H3BNI2 H3BNZ2 H3BP59 H3BRF7 H3BSX3 H3BTC3 H3BTM9 H3BTZ0 H3BUQ3 K7ERJ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566514.1 | TCF4-027 | 843 | 265aa | ENSP00000456983.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT3 G0LNT7 G0LNT8 H3BMC8 H3BME8 H3BNI2 H3BNZ2 H3BP59 H3BRF7 H3BSX3 H3BT24 H3BTC3 H3BTM9 H3BUQ3 K7ERJ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000565908.2 | TCF4-024 | 752 | 209aa | ENSP00000454584.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT3 H3BMC8 H3BME8 H3BNI2 H3BP59 H3BRF7 H3BSX3 H3BTC3 H3BUQ3 K7ERJ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000570146.1 | TCF4-038 | 661 | 166aa | ENSP00000468729.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000568186.1 | TCF4-033 | 632 | 119aa | ENSP00000458122.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT7 G0LNT8 H3BRF7 H3BSX3 H3BTM9 K7ERJ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562847.1 | TCF4-029 | 597 | 56aa | ENSP00000454866.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BNI2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562607.1 | TCF4-035 | 594 | 123aa | ENSP00000455071.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT7 G0LNT8 H3BNZ2 H3BRF7 H3BSX3 H3BTM9 K7ERJ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566777.1 | TCF4-032 | 588 | 112aa | ENSP00000457245.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT8 H3BRF7 H3BSX3 H3BTM9 K7ERJ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000563888.2 | TCF4-025 | 581 | 144aa | ENSP00000457747.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT3 H3BMC8 H3BME8 H3BNI2 H3BUQ3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000569357.1 | TCF4-022 | 578 | 99aa | ENSP00000454352.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT3 H3BME8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000564343.1 | TCF4-023 | 568 | 135aa | ENSP00000454328.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT3 H3BMC8 H3BME8 H3BNI2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562512.2 | TCF4-031 | 567 | 40aa | ENSP00000456917.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BSX3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000569012.1 | TCF4-034 | 561 | 162aa | ENSP00000455304.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT7 G0LNT8 H3BNZ2 H3BPG3 H3BRF7 H3BSX3 H3BTM9 K7ERJ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000563824.1 | TCF4-028 | 557 | 157aa | ENSP00000457113.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT3 H3BMC8 H3BME8 H3BNI2 H3BP59 H3BSX3 H3BTC3 H3BUQ3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000568147.1 | TCF4-026 | 550 | 153aa | ENSP00000455163.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT3 H3BMC8 H3BME8 H3BNI2 H3BP59 H3BSX3 H3BUQ3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000565124.1 | TCF4-020 | 532 | 160aa | ENSP00000457082.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT2 G0LNT3 H3BT95 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562030.1 | TCF4-014 | 515 | 53aa | ENSP00000456220.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRF7 H3BSX3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562543.1 | TCF4-040 | 492 | 139aa | ENSP00000455450.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT3 G0LNT4 H3BME8 H3BNI2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000590810.1 | TCF4-047 | 454 | 53aa | ENSP00000468277.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRF7 H3BSX3 K7ERJ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562638.1 | TCF4-043 | 401 | 118aa | ENSP00000456802.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT7 G0LNT8 H3BRF7 H3BSX3 H3BTM9 K7ERJ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000565393.1 | TCF4-039 | 314 | 105aa | ENSP00000454441.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G0LNT2 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000563760.1 | TCF4-037 | 851 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000566376.2 | TCF4-036 | 463 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000565580.1 | TCF4-030 | 298 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000563686.1 | TCF4-017 | 6019 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000562680.1 | TCF4-018 | 5354 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
