Gene: NUP50 ENSG00000093000

Description

nucleoporin 50kDa [Source:HGNC Symbol;Acc:8065]

Gene Synonyms

NPAP60, NPAP60L

Location

Chromosome 22: 45,559,722-45,583,896 forward strand.

GRCh37:CM000684.1

About this gene

This gene has 20 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000347635.4	NUP50-001	5233	468aa	ENSP00000345895.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14062	B4E2D3 Q9UKX7	NM_007172.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000407019.2	NUP50-002	2059	440aa	ENSP00000385555.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14063	B4E2D3 Q9UKX7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000425733.2	NUP50-201	2030	218aa	ENSP00000406928.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2D3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000396096.2	NUP50-003	1895	440aa	ENSP00000379403.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14063	B4E2D3 Q9UKX7	NM_153645.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000417702.1	NUP50-007	584	8aa	ENSP00000394450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424634.1	NUP50-005	579	45aa	ENSP00000415062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432340.1	NUP50-013	551	4aa	ENSP00000400465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000422489.1	NUP50-017	543	178aa	ENSP00000416264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QY21	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430547.1	NUP50-010	537	76aa	ENSP00000397960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHA5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000445721.1	NUP50-011	443	10aa	ENSP00000398297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419387.1	NUP50-016	1018	30aa	ENSP00000391987.1	Nonsense mediated decay		F2Z3L9	-	-
ENST00000434760.1	NUP50-009	763	30aa	ENSP00000388426.1	Nonsense mediated decay		F2Z3L9	-	-
ENST00000486184.1	NUP50-018	821	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461194.1	NUP50-014	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461437.1	NUP50-008	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491860.1	NUP50-019	493	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493456.1	NUP50-012	478	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484186.1	NUP50-015	431	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469163.1	NUP50-004	3507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497960.1	NUP50-006	986	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Favourite species

All species

Recent locations

Gene: NUP50 ENSG00000093000

Summary