Description
cleavage and polyadenylation specific factor 7, 59kDa [Source:HGNC Symbol;Acc:30098]
Gene Synonyms
CFIm59, FLJ12529
Location
Chromosome 11: 61,170,121-61,197,503 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 25 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000340437.4 | CPSF7-001 | 3687 | 514aa | ENSP00000345412.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8006 | C9J286 C9J323 C9JM38 Q8N684 | NM_024811.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000394888.4 | CPSF7-006 | 3650 | 471aa | ENSP00000378352.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44619 | C9J286 C9J323 C9JM38 Q8N684 | NM_001136040.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000439958.3 | CPSF7-005 | 3524 | 462aa | ENSP00000397203.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44620 | C9J286 C9J323 C9JM38 F5H047 F5H6M0 J3QT54 Q8N684 | NM_001142565.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000448745.1 | CPSF7-007 | 1749 | 462aa | ENSP00000407394.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44620 | C9J286 C9J323 C9JM38 F5H047 F5H6M0 J3QT54 Q8N684 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000477890.2 | CPSF7-027 | 1234 | 374aa | ENSP00000437860.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J286 C9J323 C9JM38 F5H669 F5H6M0 J3QT54 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539952.1 | CPSF7-015 | 953 | 288aa | ENSP00000438381.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J286 C9J323 C9JM38 F5H047 F5H6M0 J3QT54 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000413232.1 | CPSF7-002 | 727 | 204aa | ENSP00000393828.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J286 C9J323 C9JM38 J3QT54 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000544585.1 | CPSF7-013 | 722 | 219aa | ENSP00000437531.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J286 C9J323 C9JM38 F5H6M0 J3QT54 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000450000.1 | CPSF7-003 | 574 | 145aa | ENSP00000391359.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J286 C9J323 C9JM38 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000413184.2 | CPSF7-017 | 571 | 138aa | ENSP00000414295.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JM38 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000449811.1 | CPSF7-010 | 567 | 143aa | ENSP00000392400.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J286 C9JM38 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000541963.1 | CPSF7-025 | 549 | 98aa | ENSP00000446330.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H1W4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000535222.1 | CPSF7-019 | 940 | 100aa | ENSP00000446193.1 | Nonsense mediated decay | F5H2K8 | - | - | |
| ENST00000537162.1 | CPSF7-020 | 801 | 101aa | ENSP00000442819.1 | Nonsense mediated decay | F5H6P5 | - | - | |
| ENST00000544990.1 | CPSF7-026 | 646 | 102aa | ENSP00000440414.1 | Nonsense mediated decay | F5GXA3 | - | - | |
| ENST00000536548.1 | CPSF7-004 | 598 | 101aa | ENSP00000437467.1 | Nonsense mediated decay | F5H6P5 | - | - | |
| ENST00000536145.1 | CPSF7-022 | 546 | 101aa | ENSP00000437768.1 | Nonsense mediated decay | F5H6A8 | - | - | |
| ENST00000543545.1 | CPSF7-023 | 495 | 93aa | ENSP00000443504.1 | Nonsense mediated decay | F5H5B7 | - | - | |
| ENST00000494016.1 | CPSF7-014 | 656 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000545934.1 | CPSF7-016 | 565 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000463244.2 | CPSF7-024 | 545 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000544669.1 | CPSF7-012 | 1800 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000537641.1 | CPSF7-018 | 1719 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000474684.1 | CPSF7-009 | 635 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000489728.1 | CPSF7-011 | 488 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
