Description
recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:5724]
Gene Synonyms
AOS3, CBF1, IGKJRB, IGKJRB1, KBF2, RBP-J, RBPJK, RBPSUH, SUH, csl
Location
Chromosome 4: 26,165,077-26,436,541 forward strand.
GRCh37:CM000666.1
About this gene
This gene has 31 transcripts (splice variants), 1 paralogue and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000342295.1 | RBPJ-201 | 2388 | 500aa | ENSP00000345206.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3437 | D6R946 D6RA45 D6RB37 D6RBQ8 Q06330 | NM_005349.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000342320.4 | RBPJ-003 | 5549 | 486aa | ENSP00000340124.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33969 | D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RE93 D6REC2 D6REP3 D6RF98 D6RIZ8 Q06330 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000355476.3 | RBPJ-202 | 2499 | 486aa | ENSP00000347659.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33969 | D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RE93 D6REC2 D6REP3 D6RF98 D6RIZ8 Q06330 | NM_203284.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000348160.4 | RBPJ-030 | 1752 | 487aa | ENSP00000339699.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43219 | D6RA45 D6RB37 D6RBQ8 Q06330 | NM_015874.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000361572.6 | RBPJ-002 | 1697 | 500aa | ENSP00000354528.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3437 | D6R946 D6RA45 D6RB37 D6RBQ8 Q06330 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000507561.1 | RBPJ-007 | 1689 | 465aa | ENSP00000423907.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RA45 D6RB37 D6RBQ8 Q06330 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000345843.3 | RBPJ-001 | 1682 | 485aa | ENSP00000305815.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3436 | D6RA45 D6RB37 D6RBQ8 Q06330 | NM_203283.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000504907.1 | RBPJ-010 | 1682 | 382aa | ENSP00000423703.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R927 D6R9K5 D6R9X3 D6RA45 D6RAT2 D6RB37 D6RBQ8 D6RE93 D6REC2 D6REP3 D6RF98 D6RIZ8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000512671.1 | RBPJ-005 | 795 | 178aa | ENSP00000423644.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R946 D6RB37 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000505958.1 | RBPJ-006 | 758 | 28aa | ENSP00000426872.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RE93 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000504938.1 | RBPJ-020 | 731 | 143aa | ENSP00000424459.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RB37 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000510778.2 | RBPJ-029 | 716 | 229aa | ENSP00000427170.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RB37 D6RBQ8 D6RCM1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000515573.1 | RBPJ-017 | 698 | 189aa | ENSP00000423406.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RA45 D6RB37 D6RBQ8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000512351.1 | RBPJ-004 | 609 | 94aa | ENSP00000424789.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAT2 D6RE93 D6REP3 D6RF98 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507574.1 | RBPJ-015 | 607 | 157aa | ENSP00000422617.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RB37 D6RBQ8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000514675.1 | RBPJ-016 | 578 | 110aa | ENSP00000423575.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9K5 D6R9X3 D6RAT2 D6RE93 D6REP3 D6RF98 D6RIZ8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000511546.1 | RBPJ-018 | 572 | 107aa | ENSP00000422838.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9X3 D6RAT2 D6RE93 D6REP3 D6RF98 D6RIZ8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000514730.1 | RBPJ-014 | 569 | 113aa | ENSP00000425061.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9K5 D6R9X3 D6RAT2 D6RE93 D6REC2 D6REP3 D6RF98 D6RIZ8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000506956.1 | RBPJ-011 | 566 | 97aa | ENSP00000425750.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAT2 D6RE93 D6REP3 D6RF98 D6RIZ8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000509158.1 | RBPJ-013 | 555 | 49aa | ENSP00000424804.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RE93 D6REP3 D6RF98 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000504423.1 | RBPJ-026 | 405 | 135aa | ENSP00000421804.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y8R3 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000514807.1 | RBPJ-012 | 340 | 48aa | ENSP00000424989.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RE93 D6REP3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000513182.1 | RBPJ-024 | 537 | 53aa | ENSP00000427344.1 | Nonsense mediated decay | D6RIV8 | - | - | |
| ENST00000511401.1 | RBPJ-022 | 577 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000514656.3 | RBPJ-019 | 455 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000515023.1 | RBPJ-023 | 388 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000514380.1 | RBPJ-009 | 1519 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000505727.1 | RBPJ-028 | 860 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000511451.1 | RBPJ-021 | 742 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000506903.1 | RBPJ-025 | 658 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000510725.1 | RBPJ-027 | 546 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
