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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: APOD ENSG00000189058

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Description

apolipoprotein D [Source:HGNC Symbol;Acc:612]

Location

Chromosome 3: 195,295,573-195,311,076 reverse strand.

GRCh37:CM000665.1

About this gene

This gene has 5 transcripts (splice variants) and 411 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343267.3	APOD-001	1130	189aa	ENSP00000345179.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33925	C9JX71 P05090	NM_001647.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000421243.1	APOD-005	782	215aa	ENSP00000415235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JF17 C9JX71	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000453131.1	APOD-004	681	149aa	ENSP00000393076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JX71	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000458447.1	APOD-003	950	108aa	ENSP00000391597.1	Nonsense mediated decay		F8WBT9	-	-
ENST00000463719.1	APOD-002	1210	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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